WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06A4.4.1 Sequence Name  K06A4.4.1
Length (nt)  860   Chromosome Location  V: 9501401-9504580
Chromosome . Primary Identifier  V Chromosome Location . Start  9501401
Chromosome Location . End  9504580 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06A4.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010594 swt-5 K06A4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06A4.4 K06A4.4 720   V: 9501402-9501526

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K06A4.4.1 9501401 9504580 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192801   126   V: 9501401-9501526 Caenorhabditis elegans
Exon192802   78   V: 9501774-9501851 Caenorhabditis elegans
Exon192803   124   V: 9503146-9503269 Caenorhabditis elegans
Exon192804   93   V: 9503320-9503412 Caenorhabditis elegans
Exon192805   63   V: 9503471-9503533 Caenorhabditis elegans
Exon192808   120   V: 9503649-9503768 Caenorhabditis elegans
Exon192809   256   V: 9504325-9504580 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K06A4.4.1 9501401 9504580 1

1 Sequence

Length
860

1 Sequence Ontology Term

Identifier Name Description
transcript