WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50F4.3.1 Sequence Name  C50F4.3.1
Length (nt)  1194   Chromosome Location  V: 9534921-9536404
Chromosome . Primary Identifier  V Chromosome Location . Start  9534921
Chromosome Location . End  9536404 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50F4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008231 tag-329 C50F4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50F4.3 C50F4.3 1125   V: 9534944-9535182

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50F4.3.1 9534921 9536404 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon192878   262   V: 9534921-9535182 Caenorhabditis elegans
Exon192879   85   V: 9535230-9535314 Caenorhabditis elegans
Exon192880   166   V: 9535374-9535539 Caenorhabditis elegans
Exon192881   80   V: 9535674-9535753 Caenorhabditis elegans
Exon192882   601   V: 9535804-9536404 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50F4.3.1 9534921 9536404 1

1 Sequence

Length
1194

1 Sequence Ontology Term

Identifier Name Description
transcript