WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58E6.1.1 Sequence Name  F58E6.1.1
Length (nt)  1821   Chromosome Location  V: 9741206-9744331
Chromosome . Primary Identifier  V Chromosome Location . Start  9741206
Chromosome Location . End  9744331 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58E6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010251 sta-2 F58E6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58E6.1 F58E6.1 1704   V: 9741223-9741342

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58E6.1.1 9741206 9744331 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon193475   137   V: 9741206-9741342 Caenorhabditis elegans
Exon193476   470   V: 9741421-9741890 Caenorhabditis elegans
Exon193477   117   V: 9741991-9742107 Caenorhabditis elegans
Exon193478   91   V: 9742156-9742246 Caenorhabditis elegans
Exon193479   114   V: 9742294-9742407 Caenorhabditis elegans
Exon193480   84   V: 9742450-9742533 Caenorhabditis elegans
Exon193481   222   V: 9742657-9742878 Caenorhabditis elegans
Exon193482   137   V: 9743189-9743325 Caenorhabditis elegans
Exon193483   134   V: 9743376-9743509 Caenorhabditis elegans
Exon193484   119   V: 9743892-9744010 Caenorhabditis elegans
Exon193485   196   V: 9744136-9744331 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58E6.1.1 9741206 9744331 1

1 Sequence

Length
1821

1 Sequence Ontology Term

Identifier Name Description
transcript