WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R07B5.9i Sequence Name  R07B5.9i
Length (nt)  3771   Chromosome Location  V: 9846598-9847140
Chromosome . Primary Identifier  V Chromosome Location . Start  9846598
Chromosome Location . End  9847140
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B5.9i

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48008 LSY-12, isoform i 141.4 1256 Caenorhabditis elegans
 

Other

14 RNAi

WormBase ID
WBRNAi00051424
WBRNAi00051425
WBRNAi00026051
WBRNAi00027433
WBRNAi00001145
WBRNAi00062990
WBRNAi00062991
WBRNAi00017512
WBRNAi00071557
WBRNAi00077417
WBRNAi00084633
WBRNAi00084637
WBRNAi00117757
WBRNAi00117756

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R07B5.9i 9846598 9847140 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00045419 lsy-12 R07B5.9 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:R07B5.9i 9846598 9847140 -1
CDS:R07B5.9i 9847496 9848233 -1
CDS:R07B5.9i 9848415 9849058 -1
CDS:R07B5.9i 9849645 9849822 -1
CDS:R07B5.9i 9850207 9850380 -1
CDS:R07B5.9i 9850430 9850532 -1
CDS:R07B5.9i 9850726 9850825 -1
CDS:R07B5.9i 9850879 9851276 -1
CDS:R07B5.9i 9851803 9852161 -1
CDS:R07B5.9i 9852310 9852501 -1
CDS:R07B5.9i 9852545 9852730 -1
CDS:R07B5.9i 9853641 9853741 -1
CDS:R07B5.9i 9856276 9856330 -1

1 Sequence

Length
3771

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R07B5.9i.1 R07B5.9i.1 3771   V: 9846598-9856330