WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50H2.1b.1 Sequence Name  C50H2.1b.1
Length (nt)  3145   Chromosome Location  V: 9889837-9894850
Chromosome . Primary Identifier  V Chromosome Location . Start  9889837
Chromosome Location . End  9894850 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50H2.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008239 fshr-1 C50H2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50H2.1b C50H2.1b 2799   V: 9889960-9890222

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50H2.1b.1 9889837 9894850 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194042   386   V: 9889837-9890222 Caenorhabditis elegans
Exon194046   72   V: 9891278-9891349 Caenorhabditis elegans
Exon194048   150   V: 9891395-9891544 Caenorhabditis elegans
Exon194050   216   V: 9891594-9891809 Caenorhabditis elegans
Exon194052   75   V: 9891857-9891931 Caenorhabditis elegans
Exon194054   169   V: 9891981-9892149 Caenorhabditis elegans
Exon194056   217   V: 9892194-9892410 Caenorhabditis elegans
Exon194058   276   V: 9892611-9892886 Caenorhabditis elegans
Exon194060   181   V: 9892931-9893111 Caenorhabditis elegans
Exon194062   253   V: 9893185-9893437 Caenorhabditis elegans
Exon194064   402   V: 9893483-9893884 Caenorhabditis elegans
Exon194066   357   V: 9893943-9894299 Caenorhabditis elegans
Exon194068   391   V: 9894460-9894850 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50H2.1b.1 9889837 9894850 1

1 Sequence

Length
3145

1 Sequence Ontology Term

Identifier Name Description
transcript