WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50H2.3a.1 Sequence Name  C50H2.3a.1
Length (nt)  2840   Chromosome Location  V: 9907632-9915121
Chromosome . Primary Identifier  V Chromosome Location . Start  9907632
Chromosome Location . End  9915121 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50H2.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003173 mec-9 C50H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50H2.3a C50H2.3a 2517   V: 9907906-9908144

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C50H2.3a.1 9907632 9915121 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194090   513   V: 9907632-9908144 Caenorhabditis elegans
Exon194091   255   V: 9908192-9908446 Caenorhabditis elegans
Exon194093   114   V: 9908507-9908620 Caenorhabditis elegans
Exon194095   138   V: 9908663-9908800 Caenorhabditis elegans
Exon194097   138   V: 9908851-9908988 Caenorhabditis elegans
Exon194099   63   V: 9909178-9909240 Caenorhabditis elegans
Exon194101   106   V: 9909377-9909482 Caenorhabditis elegans
Exon194103   92   V: 9909560-9909651 Caenorhabditis elegans
Exon194105   150   V: 9909965-9910114 Caenorhabditis elegans
Exon194107   51   V: 9910296-9910346 Caenorhabditis elegans
Exon194110   110   V: 9912344-9912453 Caenorhabditis elegans
Exon194111   94   V: 9912888-9912981 Caenorhabditis elegans
Exon194112   132   V: 9913029-9913160 Caenorhabditis elegans
Exon194113   105   V: 9913219-9913323 Caenorhabditis elegans
Exon194114   135   V: 9913370-9913504 Caenorhabditis elegans
Exon194115   111   V: 9913548-9913658 Caenorhabditis elegans
Exon194116   192   V: 9913808-9913999 Caenorhabditis elegans
Exon194119   201   V: 9914733-9914933 Caenorhabditis elegans
Exon194120   140   V: 9914982-9915121 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C50H2.3a.1 9907632 9915121 -1

1 Sequence

Length
2840

1 Sequence Ontology Term

Identifier Name Description
transcript