WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08H10.1l.1 Sequence Name  K08H10.1l.1
Length (nt)  4146   Chromosome Location  V: 10013274-10027720
Chromosome . Primary Identifier  V Chromosome Location . Start  10013274
Chromosome Location . End  10027720 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08H10.1l.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002263 lea-1 K08H10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08H10.1l K08H10.1l 4146   V: 10013274-10013471

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08H10.1l.1 10013274 10027720 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194348   198   V: 10013274-10013471 Caenorhabditis elegans
Exon194359   114   V: 10020545-10020658 Caenorhabditis elegans
Exon194377   783   V: 10020703-10021485 Caenorhabditis elegans
Exon194392   567   V: 10021534-10022100 Caenorhabditis elegans
Exon194407   339   V: 10022196-10022534 Caenorhabditis elegans
Exon194416   372   V: 10022677-10023048 Caenorhabditis elegans
Exon194429   1341   V: 10023559-10024899 Caenorhabditis elegans
Exon194445   66   V: 10024954-10025019 Caenorhabditis elegans
Exon194455   177   V: 10025535-10025711 Caenorhabditis elegans
Exon194466   81   V: 10026461-10026541 Caenorhabditis elegans
Exon194476   108   V: 10027613-10027720 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08H10.1l.1 10013274 10027720 1

1 Sequence

Length
4146

1 Sequence Ontology Term

Identifier Name Description
transcript