WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08B6.7c.1 Sequence Name  C08B6.7c.1
Length (nt)  2693   Chromosome Location  V: 10130399-10133946
Chromosome . Primary Identifier  V Chromosome Location . Start  10130399
Chromosome Location . End  10133946 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08B6.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007428 wdr-20 C08B6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08B6.7c C08B6.7c 2214   V: 10130878-10130894

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08B6.7c.1 10130399 10133946 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194745   496   V: 10130399-10130894 Caenorhabditis elegans
Exon194754   282   V: 10130931-10131212 Caenorhabditis elegans
Exon194759   107   V: 10131344-10131450 Caenorhabditis elegans
Exon194764   766   V: 10131496-10132261 Caenorhabditis elegans
Exon194769   205   V: 10132309-10132513 Caenorhabditis elegans
Exon194774   128   V: 10132565-10132692 Caenorhabditis elegans
Exon194779   140   V: 10132737-10132876 Caenorhabditis elegans
Exon194784   114   V: 10132979-10133092 Caenorhabditis elegans
Exon194789   68   V: 10133136-10133203 Caenorhabditis elegans
Exon194794   305   V: 10133287-10133591 Caenorhabditis elegans
Exon194795   82   V: 10133865-10133946 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08B6.7c.1 10130399 10133946 -1

1 Sequence

Length
2693

1 Sequence Ontology Term

Identifier Name Description
transcript