WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22E12.4a.1 Sequence Name  F22E12.4a.1
Length (nt)  2631   Chromosome Location  V: 10468517-10476914
Chromosome . Primary Identifier  V Chromosome Location . Start  10468517
Chromosome Location . End  10476914 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22E12.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001178 egl-9 F22E12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22E12.4a F22E12.4a 2172   V: 10468525-10468599

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22E12.4a.1 10468517 10476914 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195754   83   V: 10468517-10468599 Caenorhabditis elegans
Exon195757   129   V: 10468944-10469072 Caenorhabditis elegans
Exon195762   478   V: 10470400-10470877 Caenorhabditis elegans
Exon195768   194   V: 10470923-10471116 Caenorhabditis elegans
Exon195778   123   V: 10473680-10473802 Caenorhabditis elegans
Exon195785   84   V: 10473933-10474016 Caenorhabditis elegans
Exon195792   95   V: 10474093-10474187 Caenorhabditis elegans
Exon195797   746   V: 10474812-10475557 Caenorhabditis elegans
Exon195804   63   V: 10475642-10475704 Caenorhabditis elegans
Exon195811   636   V: 10476279-10476914 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22E12.4a.1 10468517 10476914 1

1 Sequence

Length
2631

1 Sequence Ontology Term

Identifier Name Description
transcript