WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F25D1.1c Sequence Name  F25D1.1c
Length (nt)  1158   Chromosome Location  V: 10533382-10533720
Chromosome . Primary Identifier  V Chromosome Location . Start  10533382
Chromosome Location . End  10533720
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25D1.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41642 PPM-1.A, isoform c 43.0 385 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00045485
WBRNAi00013860
WBRNAi00031362

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F25D1.1c 10533382 10533720 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006460 ppm-1.A F25D1.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F25D1.1c 10533382 10533720 -1
CDS:F25D1.1c 10534129 10534490 -1
CDS:F25D1.1c 10534553 10534619 -1
CDS:F25D1.1c 10534670 10534930 -1
CDS:F25D1.1c 10534978 10535046 -1
CDS:F25D1.1c 10535150 10535209 -1

1 Sequence

Length
1158

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F25D1.1c.1 F25D1.1c.1 1158   V: 10533382-10535209