WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21C9.2b.1 Sequence Name  T21C9.2b.1
Length (nt)  2250   Chromosome Location  V: 10566655-10569047
Chromosome . Primary Identifier  V Chromosome Location . Start  10566655
Chromosome Location . End  10569047 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21C9.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006934 vps-54 T21C9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21C9.2b T21C9.2b 2250   V: 10566655-10566757

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21C9.2b.1 10566655 10569047 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196026   103   V: 10566655-10566757 Caenorhabditis elegans
Exon196028   406   V: 10566804-10567209 Caenorhabditis elegans
Exon196030   194   V: 10567254-10567447 Caenorhabditis elegans
Exon196031   1547   V: 10567501-10569047 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21C9.2b.1 10566655 10569047 -1

1 Sequence

Length
2250

1 Sequence Ontology Term

Identifier Name Description
transcript