WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D1054.13a Sequence Name  D1054.13a
Length (nt)  1446   Chromosome Location  V: 10802450-10802714
Chromosome . Primary Identifier  V Chromosome Location . Start  10802450
Chromosome Location . End  10802714
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1054.13a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05531 SECS-1, isoform a 53.4 481 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00043388
WBRNAi00012532
WBRNAi00030343
WBRNAi00066640

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D1054.13a 10802450 10802714 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008379 secs-1 D1054.13 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:D1054.13a 10802450 10802714 -1
CDS:D1054.13a 10802761 10802934 -1
CDS:D1054.13a 10802978 10803614 -1
CDS:D1054.13a 10803663 10803781 -1
CDS:D1054.13a 10803834 10803901 -1
CDS:D1054.13a 10803954 10804046 -1
CDS:D1054.13a 10804097 10804186 -1

1 Sequence

Length
1446

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D1054.13a.1 D1054.13a.1 1560   V: 10802336-10804186