WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13G3.3a.4 Sequence Name  C13G3.3a.4
Length (nt)  2109   Chromosome Location  V: 11027167-11030546
Chromosome . Primary Identifier  V Chromosome Location . Start  11027167
Chromosome Location . End  11030546 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13G3.3a.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007554 pptr-2 C13G3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13G3.3a C13G3.3a 1674   V: 11027513-11027656

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C13G3.3a.4 11027167 11030546 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197403   490   V: 11027167-11027656 Caenorhabditis elegans
Exon197411   1062   V: 11027713-11028774 Caenorhabditis elegans
Exon197420   314   V: 11028818-11029131 Caenorhabditis elegans
Exon197429   93   V: 11029178-11029270 Caenorhabditis elegans
Exon197438   66   V: 11029322-11029387 Caenorhabditis elegans
Exon197447   84   V: 11030463-11030546 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C13G3.3a.4 11027167 11030546 -1

1 Sequence

Length
2109

1 Sequence Ontology Term

Identifier Name Description
transcript