WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04C12.5.1 Sequence Name  T04C12.5.1
Length (nt)  1281   Chromosome Location  V: 11076777-11078154
Chromosome . Primary Identifier  V Chromosome Location . Start  11076777
Chromosome Location . End  11078154 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04C12.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000064 act-2 T04C12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04C12.5 T04C12.5 1131   V: 11076900-11077059

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04C12.5.1 11076777 11078154 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197552   283   V: 11076777-11077059 Caenorhabditis elegans
Exon197553   781   V: 11077112-11077892 Caenorhabditis elegans
Exon197554   217   V: 11077938-11078154 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04C12.5.1 11076777 11078154 -1

1 Sequence

Length
1281

1 Sequence Ontology Term

Identifier Name Description
transcript