WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55C10.1a Sequence Name  F55C10.1a
Length (nt)  516   Chromosome Location  V: 11375791-11375793
Chromosome . Primary Identifier  V Chromosome Location . Start  11375791
Chromosome Location . End  11375793
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55C10.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32679 CNB-1, isoform a 19.7 171 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00048457

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F55C10.1a 11375791 11375793 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000554 cnb-1 F55C10.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F55C10.1a 11375791 11375793 1
CDS:F55C10.1a 11375909 11375948 1
CDS:F55C10.1a 11376176 11376352 1
CDS:F55C10.1a 11376432 11376553 1
CDS:F55C10.1a 11377095 11377217 1
CDS:F55C10.1a 11377336 11377386 1

1 Sequence

Length
516

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55C10.1a.1 F55C10.1a.1 1005   V: 11375742-11377826