WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55A6.3.2 Sequence Name  C55A6.3.2
Length (nt)  870   Chromosome Location  V: 11512309-11513532
Chromosome . Primary Identifier  V Chromosome Location . Start  11512309
Chromosome Location . End  11513532 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55A6.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008332 C55A6.3 C55A6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55A6.3 C55A6.3 753   V: 11512374-11512475

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55A6.3.2 11512309 11513532 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon198799   167   V: 11512309-11512475 Caenorhabditis elegans
Exon198802   354   V: 11512575-11512928 Caenorhabditis elegans
Exon198804   168   V: 11513074-11513241 Caenorhabditis elegans
Exon198805   136   V: 11513293-11513428 Caenorhabditis elegans
Exon198807   45   V: 11513488-11513532 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55A6.3.2 11512309 11513532 -1

1 Sequence

Length
870

1 Sequence Ontology Term

Identifier Name Description
transcript