WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H12C20.2 Sequence Name  H12C20.2
Length (nt)  2418   Chromosome Location  V: 11566889-11566957
Chromosome . Primary Identifier  V Chromosome Location . Start  11566889
Chromosome Location . End  11566957
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H12C20.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19915 PMS-2 91.3 805 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00000801
WBRNAi00049366
WBRNAi00014552
WBRNAi00016238
WBRNAi00077839
WBRNAi00033695
WBRNAi00007528
WBRNAi00064075

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H12C20.2 11566889 11566957 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004064 pms-2 H12C20.2 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:H12C20.2 11566889 11566957 -1
CDS:H12C20.2 11567007 11567185 -1
CDS:H12C20.2 11567233 11567399 -1
CDS:H12C20.2 11567448 11567615 -1
CDS:H12C20.2 11567661 11567836 -1
CDS:H12C20.2 11567897 11568377 -1
CDS:H12C20.2 11568425 11568617 -1
CDS:H12C20.2 11568667 11568751 -1
CDS:H12C20.2 11568800 11568899 -1
CDS:H12C20.2 11568951 11569424 -1
CDS:H12C20.2 11569467 11569729 -1
CDS:H12C20.2 11569783 11569845 -1

1 Sequence

Length
2418

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H12C20.2.2 H12C20.2.2 3203   V: 11566801-11570601
Transcript:H12C20.2.1 H12C20.2.1 2561   V: 11566804-11569903