WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F46F3.4a Sequence Name  F46F3.4a
Length (nt)  2310   Chromosome Location  V: 11675962-11676021
Chromosome . Primary Identifier  V Chromosome Location . Start  11675962
Chromosome Location . End  11676021
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F3.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19874 APE-1, isoform a 85.4 769 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00047546
WBRNAi00015102
WBRNAi00064212
WBRNAi00022859
WBRNAi00032375
WBRNAi00064186

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F46F3.4a 11675962 11676021 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000146 ape-1 F46F3.4 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F46F3.4a 11675962 11676021 1
CDS:F46F3.4a 11676256 11676387 1
CDS:F46F3.4a 11681673 11681875 1
CDS:F46F3.4a 11681948 11682206 1
CDS:F46F3.4a 11682277 11682512 1
CDS:F46F3.4a 11683188 11683425 1
CDS:F46F3.4a 11683626 11684752 1
CDS:F46F3.4a 11684800 11684854 1

1 Sequence

Length
2310

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F46F3.4a.1 F46F3.4a.1 2754   V: 11675938-11685274