WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W05E10.4b Sequence Name  W05E10.4b
Length (nt)  1827   Chromosome Location  V: 11709838-11710035
Chromosome . Primary Identifier  V Chromosome Location . Start  11709838
Chromosome Location . End  11710035
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W05E10.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46079 TRE-3, isoform b 70.2 608 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00054822
WBRNAi00036303

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W05E10.4b 11709838 11710035 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006609 tre-3 W05E10.4 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:W05E10.4b 11709838 11710035 -1
CDS:W05E10.4b 11710085 11710141 -1
CDS:W05E10.4b 11712502 11712576 -1
CDS:W05E10.4b 11713574 11713726 -1
CDS:W05E10.4b 11713774 11714070 -1
CDS:W05E10.4b 11714120 11714209 -1
CDS:W05E10.4b 11714253 11714901 -1
CDS:W05E10.4b 11715120 11715216 -1
CDS:W05E10.4b 11715263 11715363 -1
CDS:W05E10.4b 11715409 11715443 -1
CDS:W05E10.4b 11715757 11715831 -1

1 Sequence

Length
1827

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W05E10.4b.1 W05E10.4b.1 1968   V: 11709769-11715903