WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58H1.1.1 Sequence Name  F58H1.1.1
Length (nt)  3628   Chromosome Location  V: 11927661-11933246
Chromosome . Primary Identifier  V Chromosome Location . Start  11927661
Chromosome Location . End  11933246 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58H1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010284 aman-2 F58H1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58H1.1 F58H1.1 3438   V: 11927832-11928114

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58H1.1.1 11927661 11933246 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200101   454   V: 11927661-11928114 Caenorhabditis elegans
Exon200102   751   V: 11928166-11928916 Caenorhabditis elegans
Exon200107   292   V: 11929947-11930238 Caenorhabditis elegans
Exon200108   178   V: 11930290-11930467 Caenorhabditis elegans
Exon200109   379   V: 11930518-11930896 Caenorhabditis elegans
Exon200110   221   V: 11931440-11931660 Caenorhabditis elegans
Exon200111   345   V: 11931709-11932053 Caenorhabditis elegans
Exon200112   103   V: 11932101-11932203 Caenorhabditis elegans
Exon200113   454   V: 11932251-11932704 Caenorhabditis elegans
Exon200114   321   V: 11932747-11933067 Caenorhabditis elegans
Exon200115   130   V: 11933117-11933246 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58H1.1.1 11927661 11933246 -1

1 Sequence

Length
3628

1 Sequence Ontology Term

Identifier Name Description
transcript