WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57F5.4a.1 Sequence Name  F57F5.4a.1
Length (nt)  1951   Chromosome Location  V: 12009540-12013406
Chromosome . Primary Identifier  V Chromosome Location . Start  12009540
Chromosome Location . End  12013406 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57F5.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000073 add-2 F57F5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57F5.4a F57F5.4a 1836   V: 12009655-12009782

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57F5.4a.1 12009540 12013406 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200278   243   V: 12009540-12009782 Caenorhabditis elegans
Exon200280   250   V: 12009918-12010167 Caenorhabditis elegans
Exon200282   312   V: 12010391-12010702 Caenorhabditis elegans
Exon200285   258   V: 12011508-12011765 Caenorhabditis elegans
Exon200286   438   V: 12011929-12012366 Caenorhabditis elegans
Exon200288   149   V: 12012411-12012559 Caenorhabditis elegans
Exon200289   134   V: 12013008-12013141 Caenorhabditis elegans
Exon200290   89   V: 12013188-12013276 Caenorhabditis elegans
Exon200291   78   V: 12013329-12013406 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57F5.4a.1 12009540 12013406 -1

1 Sequence

Length
1951

1 Sequence Ontology Term

Identifier Name Description
transcript