WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07B7.2d.1 Sequence Name  R07B7.2d.1
Length (nt)  2131   Chromosome Location  V: 12056562-12059753
Chromosome . Primary Identifier  V Chromosome Location . Start  12056562
Chromosome Location . End  12059753 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B7.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011087 R07B7.2 R07B7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07B7.2d R07B7.2d 1908   V: 12056779-12056882

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07B7.2d.1 12056562 12059753 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200404   321   V: 12056562-12056882 Caenorhabditis elegans
Exon200411   207   V: 12056940-12057146 Caenorhabditis elegans
Exon200415   186   V: 12057300-12057485 Caenorhabditis elegans
Exon200419   213   V: 12057536-12057748 Caenorhabditis elegans
Exon200423   102   V: 12057799-12057900 Caenorhabditis elegans
Exon200427   138   V: 12057970-12058107 Caenorhabditis elegans
Exon200431   189   V: 12058531-12058719 Caenorhabditis elegans
Exon200435   99   V: 12058768-12058866 Caenorhabditis elegans
Exon200439   135   V: 12058933-12059067 Caenorhabditis elegans
Exon200443   541   V: 12059213-12059753 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07B7.2d.1 12056562 12059753 -1

1 Sequence

Length
2131

1 Sequence Ontology Term

Identifier Name Description
transcript