WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R07B7.12a Sequence Name  R07B7.12a
Length (nt)  1653   Chromosome Location  V: 12089073-12089189
Chromosome . Primary Identifier  V Chromosome Location . Start  12089073
Chromosome Location . End  12089189
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B7.12a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE06274 R07B7.12, isoform a 64.6 550 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00051429
WBRNAi00017515
WBRNAi00034685

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:R07B7.12a 12089073 12089189 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011096 R07B7.12 R07B7.12 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier 		Start End Strand
CDS:R07B7.12a 12089073 12089189 1
CDS:R07B7.12a 12089355 12089566 1
CDS:R07B7.12a 12089609 12089740 1
CDS:R07B7.12a 12089787 12089895 1
CDS:R07B7.12a 12090178 12090372 1
CDS:R07B7.12a 12090416 12090547 1
CDS:R07B7.12a 12090671 12091131 1
CDS:R07B7.12a 12091179 12091341 1
CDS:R07B7.12a 12091662 12091793 1

1 Sequence

Length
1653

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R07B7.12a.1 R07B7.12a.1 1731   V: 12089073-12091871