WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W07G4.6b Sequence Name  W07G4.6b
Length (nt)  1236   Chromosome Location  V: 13049828-13049998
Chromosome . Primary Identifier  V Chromosome Location . Start  13049828
Chromosome Location . End  13049998
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07G4.6b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50241 SRR-1, isoform b 45.9 411 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00054966
WBRNAi00019709

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W07G4.6b 13049828 13049998 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005652 srr-1 W07G4.6 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:W07G4.6b 13049828 13049998 -1
CDS:W07G4.6b 13050591 13050653 -1
CDS:W07G4.6b 13050706 13050966 -1
CDS:W07G4.6b 13051010 13051184 -1
CDS:W07G4.6b 13051579 13051865 -1
CDS:W07G4.6b 13051912 13052050 -1
CDS:W07G4.6b 13052098 13052233 -1
CDS:W07G4.6b 13053732 13053735 -1

1 Sequence

Length
1236

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W07G4.6b.1 W07G4.6b.1 1333   V: 13049731-13053735