WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57B1.1.1 Sequence Name  F57B1.1.1
Length (nt)  1159   Chromosome Location  V: 13193928-13195648
Chromosome . Primary Identifier  V Chromosome Location . Start  13193928
Chromosome Location . End  13195648 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57B1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010187 F57B1.1 F57B1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57B1.1 F57B1.1 1092   V: 13193995-13194144

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57B1.1.1 13193928 13195648 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203830   217   V: 13193928-13194144 Caenorhabditis elegans
Exon203831   84   V: 13194201-13194284 Caenorhabditis elegans
Exon203832   153   V: 13194331-13194483 Caenorhabditis elegans
Exon203833   181   V: 13194528-13194708 Caenorhabditis elegans
Exon203834   130   V: 13194754-13194883 Caenorhabditis elegans
Exon203835   124   V: 13194927-13195050 Caenorhabditis elegans
Exon203836   144   V: 13195106-13195249 Caenorhabditis elegans
Exon203837   126   V: 13195523-13195648 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57B1.1.1 13193928 13195648 -1

1 Sequence

Length
1159

1 Sequence Ontology Term

Identifier Name Description
transcript