WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M04G12.4a Sequence Name  M04G12.4a
Length (nt)  1740   Chromosome Location  V: 13386649-13386795
Chromosome . Primary Identifier  V Chromosome Location . Start  13386649
Chromosome Location . End  13386795
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M04G12.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36495 SOMI-1, isoform a 63.2 579 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00093858
WBRNAi00050919
WBRNAi00093866
WBRNAi00017186
WBRNAi00093860
WBRNAi00093861
WBRNAi00093862
WBRNAi00093867
WBRNAi00093868
WBRNAi00093863
WBRNAi00093864
WBRNAi00093865
WBRNAi00093859
WBRNAi00093825
WBRNAi00107207
WBRNAi00110880

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M04G12.4a 13386649 13386795 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010868 somi-1 M04G12.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:M04G12.4a 13386649 13386795 -1
CDS:M04G12.4a 13387501 13387643 -1
CDS:M04G12.4a 13387694 13388477 -1
CDS:M04G12.4a 13388906 13389490 -1
CDS:M04G12.4a 13391305 13391385 -1

1 Sequence

Length
1740

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M04G12.4a.1 M04G12.4a.1 2339   V: 13386058-13391393