WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53F1.10.1 Sequence Name  F53F1.10.1
Length (nt)  1150   Chromosome Location  V: 13425548-13426864
Chromosome . Primary Identifier  V Chromosome Location . Start  13425548
Chromosome Location . End  13426864 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53F1.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005096 srd-18 F53F1.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53F1.10 F53F1.10 1014   V: 13425572-13425816

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53F1.10.1 13425548 13426864 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204426   269   V: 13425548-13425816 Caenorhabditis elegans
Exon204427   343   V: 13425865-13426207 Caenorhabditis elegans
Exon204428   241   V: 13426278-13426518 Caenorhabditis elegans
Exon204429   297   V: 13426568-13426864 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53F1.10.1 13425548 13426864 -1

1 Sequence

Length
1150

1 Sequence Ontology Term

Identifier Name Description
transcript