WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11G10.1a.1 Sequence Name  R11G10.1a.1
Length (nt)  2227   Chromosome Location  V: 13498780-13511718
Chromosome . Primary Identifier  V Chromosome Location . Start  13498780
Chromosome Location . End  13511718 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11G10.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000233 avr-15 R11G10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11G10.1a R11G10.1a 1974   V: 13498940-13499229

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11G10.1a.1 13498780 13511718 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204648   450   V: 13498780-13499229 Caenorhabditis elegans
Exon204652   284   V: 13499285-13499568 Caenorhabditis elegans
Exon204654   683   V: 13500661-13501343 Caenorhabditis elegans
Exon204656   109   V: 13502062-13502170 Caenorhabditis elegans
Exon204661   410   V: 13508762-13509171 Caenorhabditis elegans
Exon204663   109   V: 13510263-13510371 Caenorhabditis elegans
Exon204664   182   V: 13511537-13511718 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11G10.1a.1 13498780 13511718 -1

1 Sequence

Length
2227

1 Sequence Ontology Term

Identifier Name Description
transcript