WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R11G10.1c Sequence Name  R11G10.1c
Length (nt)  540   Chromosome Location  V: 13498940-13499229
Chromosome . Primary Identifier  V Chromosome Location . Start  13498940
Chromosome Location . End  13499229
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11G10.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45109 AVR-15, isoform c 20.8 179 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00030215
WBRNAi00085183

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R11G10.1c 13498940 13499229 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000233 avr-15 R11G10.1 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier
Start End Strand
CDS:R11G10.1c 13498940 13499229 -1
CDS:R11G10.1c 13499285 13499534 -1

1 Sequence

Length
540

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R11G10.1c.1 R11G10.1c.1 540   V: 13498940-13499534