WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01D3.6b.1 Sequence Name  T01D3.6b.1
Length (nt)  2919   Chromosome Location  V: 13716824-13720414
Chromosome . Primary Identifier  V Chromosome Location . Start  13716824
Chromosome Location . End  13720414 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01D3.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011330 T01D3.6 T01D3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01D3.6b T01D3.6b 2748   V: 13716869-13716981

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01D3.6b.1 13716824 13720414 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205195   158   V: 13716824-13716981 Caenorhabditis elegans
Exon205198   148   V: 13717246-13717393 Caenorhabditis elegans
Exon205200   122   V: 13717442-13717563 Caenorhabditis elegans
Exon205202   342   V: 13717609-13717950 Caenorhabditis elegans
Exon205204   397   V: 13718006-13718402 Caenorhabditis elegans
Exon205205   90   V: 13718449-13718538 Caenorhabditis elegans
Exon205208   954   V: 13718634-13719587 Caenorhabditis elegans
Exon205210   367   V: 13719653-13720019 Caenorhabditis elegans
Exon205212   341   V: 13720074-13720414 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01D3.6b.1 13716824 13720414 1

1 Sequence

Length
2919

1 Sequence Ontology Term

Identifier Name Description
transcript