WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H39E23.1m.1 Sequence Name  H39E23.1m.1
Length (nt)  5149   Chromosome Location  V: 14112046-14145367
Chromosome . Primary Identifier  V Chromosome Location . Start  14112046
Chromosome Location . End  14145367 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H39E23.1m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003916 par-1 H39E23.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H39E23.1m H39E23.1m 3390   V: 14117600-14117770

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:H39E23.1m.1 14112046 14145367 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206356   870   V: 14112046-14112915 Caenorhabditis elegans
Exon206378   118   V: 14112966-14113083 Caenorhabditis elegans
Exon206392   246   V: 14113569-14113814 Caenorhabditis elegans
Exon206401   69   V: 14114476-14114544 Caenorhabditis elegans
Exon206418   125   V: 14115458-14115582 Caenorhabditis elegans
Exon206433   234   V: 14116447-14116680 Caenorhabditis elegans
Exon206450   268   V: 14117503-14117770 Caenorhabditis elegans
Exon206457   448   V: 14118539-14118986 Caenorhabditis elegans
Exon206474   583   V: 14120061-14120643 Caenorhabditis elegans
Exon206491   286   V: 14120733-14121018 Caenorhabditis elegans
Exon206506   144   V: 14121369-14121512 Caenorhabditis elegans
Exon206521   108   V: 14122208-14122315 Caenorhabditis elegans
Exon206536   804   V: 14122994-14123797 Caenorhabditis elegans
Exon206551   133   V: 14126111-14126243 Caenorhabditis elegans
Exon206568   215   V: 14131640-14131854 Caenorhabditis elegans
Exon206572   102   V: 14132840-14132941 Caenorhabditis elegans
Exon206576   69   V: 14133227-14133295 Caenorhabditis elegans
Exon206583   327   V: 14145041-14145367 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:H39E23.1m.1 14112046 14145367 -1

1 Sequence

Length
5149

1 Sequence Ontology Term

Identifier Name Description
transcript