WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T16A9.4c.1 Sequence Name  T16A9.4c.1
Length (nt)  2962   Chromosome Location  V: 14215345-14226469
Chromosome . Primary Identifier  V Chromosome Location . Start  14215345
Chromosome Location . End  14226469 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16A9.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011794 nep-21 T16A9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T16A9.4c T16A9.4c 2571   V: 14215681-14215857

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T16A9.4c.1 14215345 14226469 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206822   513   V: 14215345-14215857 Caenorhabditis elegans
Exon206827   105   V: 14215904-14216008 Caenorhabditis elegans
Exon206831   118   V: 14216366-14216483 Caenorhabditis elegans
Exon206835   199   V: 14216537-14216735 Caenorhabditis elegans
Exon206839   340   V: 14216796-14217135 Caenorhabditis elegans
Exon206843   100   V: 14217192-14217291 Caenorhabditis elegans
Exon206847   94   V: 14217648-14217741 Caenorhabditis elegans
Exon206852   64   V: 14218155-14218218 Caenorhabditis elegans
Exon206855   105   V: 14218471-14218575 Caenorhabditis elegans
Exon206859   404   V: 14218626-14219029 Caenorhabditis elegans
Exon206863   289   V: 14219077-14219365 Caenorhabditis elegans
Exon206867   140   V: 14219824-14219963 Caenorhabditis elegans
Exon206871   131   V: 14220006-14220136 Caenorhabditis elegans
Exon206876   287   V: 14226063-14226349 Caenorhabditis elegans
Exon206878   73   V: 14226397-14226469 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T16A9.4c.1 14215345 14226469 -1

1 Sequence

Length
2962

1 Sequence Ontology Term

Identifier Name Description
transcript