WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T16A9.4d.1 Sequence Name  T16A9.4d.1
Length (nt)  2987   Chromosome Location  V: 14215348-14226473
Chromosome . Primary Identifier  V Chromosome Location . Start  14215348
Chromosome Location . End  14226473 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16A9.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011794 nep-21 T16A9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T16A9.4d T16A9.4d 2595   V: 14215681-14215857

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T16A9.4d.1 14215348 14226473 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon206823   510   V: 14215348-14215857 Caenorhabditis elegans
Exon206828   105   V: 14215904-14216008 Caenorhabditis elegans
Exon206832   118   V: 14216366-14216483 Caenorhabditis elegans
Exon206836   199   V: 14216537-14216735 Caenorhabditis elegans
Exon206840   340   V: 14216796-14217135 Caenorhabditis elegans
Exon206844   100   V: 14217192-14217291 Caenorhabditis elegans
Exon206848   94   V: 14217648-14217741 Caenorhabditis elegans
Exon206850   88   V: 14218131-14218218 Caenorhabditis elegans
Exon206856   105   V: 14218471-14218575 Caenorhabditis elegans
Exon206860   404   V: 14218626-14219029 Caenorhabditis elegans
Exon206864   289   V: 14219077-14219365 Caenorhabditis elegans
Exon206868   140   V: 14219824-14219963 Caenorhabditis elegans
Exon206872   131   V: 14220006-14220136 Caenorhabditis elegans
Exon206877   287   V: 14226063-14226349 Caenorhabditis elegans
Exon206879   77   V: 14226397-14226473 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T16A9.4d.1 14215348 14226473 -1

1 Sequence

Length
2987

1 Sequence Ontology Term

Identifier Name Description
transcript