WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T16A9.4a Sequence Name  T16A9.4a
Length (nt)  2310   Chromosome Location  V: 14215681-14215857
Chromosome . Primary Identifier  V Chromosome Location . Start  14215681
Chromosome Location . End  14215857
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T16A9.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE18259 NEP-21, isoform a 88.3 769 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00053405
WBRNAi00018761
WBRNAi00035605
WBRNAi00089158

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T16A9.4a 14215681 14215857 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011794 nep-21 T16A9.4 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:T16A9.4a 14215681 14215857 -1
CDS:T16A9.4a 14215904 14216008 -1
CDS:T16A9.4a 14216366 14216483 -1
CDS:T16A9.4a 14216537 14216735 -1
CDS:T16A9.4a 14216796 14217135 -1
CDS:T16A9.4a 14217192 14217291 -1
CDS:T16A9.4a 14217648 14217741 -1
CDS:T16A9.4a 14218155 14218218 -1
CDS:T16A9.4a 14218471 14218575 -1
CDS:T16A9.4a 14218626 14219029 -1
CDS:T16A9.4a 14219077 14219365 -1
CDS:T16A9.4a 14219824 14219963 -1
CDS:T16A9.4a 14220006 14220136 -1
CDS:T16A9.4a 14220423 14220466 -1

1 Sequence

Length
2310

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T16A9.4a.1 T16A9.4a.1 2878   V: 14215349-14220702