WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C53A5.6b Sequence Name  C53A5.6b
Length (nt)  1722   Chromosome Location  V: 14543719-14544149
Chromosome . Primary Identifier  V Chromosome Location . Start  14543719
Chromosome Location . End  14544149
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53A5.6b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44769 RIKE-1, isoform b 63.7 573 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00094745
WBRNAi00043064
WBRNAi00085547
WBRNAi00024890
WBRNAi00008551
WBRNAi00076239
WBRNAi00030099
WBRNAi00065864
WBRNAi00112166

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C53A5.6b 14543719 14544149 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008266 rike-1 C53A5.6 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C53A5.6b 14543719 14544149 -1
CDS:C53A5.6b 14544195 14544396 -1
CDS:C53A5.6b 14544497 14544708 -1
CDS:C53A5.6b 14544862 14545480 -1
CDS:C53A5.6b 14545521 14545729 -1
CDS:C53A5.6b 14545773 14545821 -1

1 Sequence

Length
1722

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C53A5.6b.1 C53A5.6b.1 1819   V: 14543667-14545866