WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C54G10.3a Sequence Name  C54G10.3a
Length (nt)  1983   Chromosome Location  V: 14647225-14647482
Chromosome . Primary Identifier  V Chromosome Location . Start  14647225
Chromosome Location . End  14647482
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54G10.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05518 PMP-3, isoform a 75.0 660 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00113896
WBRNAi00113895
WBRNAi00043174
WBRNAi00012411
WBRNAi00030156
WBRNAi00113897
WBRNAi00094932

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C54G10.3a 14647225 14647482 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004060 pmp-3 C54G10.3 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C54G10.3a 14647225 14647482 1
CDS:C54G10.3a 14647533 14647672 1
CDS:C54G10.3a 14648062 14648578 1
CDS:C54G10.3a 14650968 14651059 1
CDS:C54G10.3a 14651537 14651853 1
CDS:C54G10.3a 14652181 14652740 1
CDS:C54G10.3a 14652792 14652890 1

1 Sequence

Length
1983

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C54G10.3a.1 C54G10.3a.1 2586   V: 14647225-14653493