WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25D7.8.1 Sequence Name  C25D7.8.1
Length (nt)  1005   Chromosome Location  V: 15066298-15067352
Chromosome . Primary Identifier  V Chromosome Location . Start  15066298
Chromosome Location . End  15067352 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25D7.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007718 otub-1 C25D7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25D7.8 C25D7.8 855   V: 15066310-15066420

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25D7.8.1 15066298 15067352 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208864   123   V: 15066298-15066420 Caenorhabditis elegans
Exon208865   882   V: 15066471-15067352 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25D7.8.1 15066298 15067352 1

1 Sequence

Length
1005

1 Sequence Ontology Term

Identifier Name Description
transcript