WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29F3.2.1 Sequence Name  C29F3.2.1
Length (nt)  1828   Chromosome Location  V: 15342054-15344581
Chromosome . Primary Identifier  V Chromosome Location . Start  15342054
Chromosome Location . End  15344581 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29F3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006954 wrt-8 C29F3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29F3.2 C29F3.2 1653   V: 15342149-15342289

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29F3.2.1 15342054 15344581 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209534   236   V: 15342054-15342289 Caenorhabditis elegans
Exon209535   165   V: 15342342-15342506 Caenorhabditis elegans
Exon209536   157   V: 15342555-15342711 Caenorhabditis elegans
Exon209537   178   V: 15342791-15342968 Caenorhabditis elegans
Exon209538   52   V: 15343017-15343068 Caenorhabditis elegans
Exon209539   54   V: 15343113-15343166 Caenorhabditis elegans
Exon209540   284   V: 15343215-15343498 Caenorhabditis elegans
Exon209541   239   V: 15343546-15343784 Caenorhabditis elegans
Exon209542   89   V: 15343826-15343914 Caenorhabditis elegans
Exon209543   198   V: 15343961-15344158 Caenorhabditis elegans
Exon209544   176   V: 15344406-15344581 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29F3.2.1 15342054 15344581 -1

1 Sequence

Length
1828

1 Sequence Ontology Term

Identifier Name Description
transcript