WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08H2.3.1 Sequence Name  R08H2.3.1
Length (nt)  1119   Chromosome Location  V: 15386746-15388870
Chromosome . Primary Identifier  V Chromosome Location . Start  15386746
Chromosome Location . End  15388870 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08H2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005386 srh-170 R08H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08H2.3 R08H2.3 942   V: 15386923-15387050

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R08H2.3.1 15386746 15388870 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209630   305   V: 15386746-15387050 Caenorhabditis elegans
Exon209631   304   V: 15387098-15387401 Caenorhabditis elegans
Exon209632   510   V: 15388361-15388870 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R08H2.3.1 15386746 15388870 -1

1 Sequence

Length
1119

1 Sequence Ontology Term

Identifier Name Description
transcript