WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54B8.6.1 Sequence Name  F54B8.6.1
Length (nt)  852   Chromosome Location  V: 15820283-15821383
Chromosome . Primary Identifier  V Chromosome Location . Start  15820283
Chromosome Location . End  15821383 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54B8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010020 srbc-48 F54B8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54B8.6 F54B8.6 852   V: 15820283-15820457

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54B8.6.1 15820283 15821383 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon210647   175   V: 15820283-15820457 Caenorhabditis elegans
Exon210648   458   V: 15820636-15821093 Caenorhabditis elegans
Exon210649   219   V: 15821165-15821383 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54B8.6.1 15820283 15821383 1

1 Sequence

Length
852

1 Sequence Ontology Term

Identifier Name Description
transcript