WormMine: Gene WBGene00005368

• WormBase Gene ID: WBGene00005368
• Gene Name: srh-152
• Sequence Name: K08G2.3
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by etr-1 based on RNA-seq studies.
• Biotype: SO:0000336
• Genetic Position: V :8.97342 ±0.000433
• Length (nt): 2378

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00005368

Genomics

0 Transcripts

Other

0 CDSs

0 RNAi Result

58 Allele

• gk963271
• gk964458
• gk964459
• WBVar02124261
• WBVar02122855
• WBVar02123136
• WBVar01976000
• WBVar02024952
• WBVar02024951
• WBVar01591451
• gk843988
• gk736801
• gk828034
• gk870552
• gk691006
• gk892965
• gk347895
• gk315113
• gk430547
• gk550645
• gk716542
• gk536491
• gk426349
• WBVar01873854
• gk519104
• WBVar01873855
• WBVar01873856
• WBVar01873857
• WBVar01777411
• WBVar01777412

1 Chromosome

• WormBase ID: V
• Organism: Caenorhabditis elegans
• Length (nt): 20924180

1 Chromosome Location

• Feature . Primary Identifier: WBGene00005368
• Start: 15841837
• End: 15844214
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrV_15841196..15841836
• Length (nt): 641
• Chromosome Location: V: 15841196-15841836
• Organism: Caenorhabditis elegans

3 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
Heat shock: 35C for 1 hour.	Transcripts that showed significantly increased expression immediately after 1-day post L4 adult hermaphrodite endu-2(tm4977) animals were exposed to 35C for 1 hour.	The DESeq2 (GalaxyVersion 2.11.40.6 + galaxy1) was used to determine differentiallyexpressed features from count tables of differential transcript abundances. log2FC > 1, FDR < 0.01.	WBPaper00065749:Heat-Shock_upregulated_endu-2(tm4977)
Heat shock: 35C for 1 hour.	Transcripts that showed significantly increased expression immediately after 1-day post L4 adult hermaphrodite N2 animals were exposed to 35C for 1 hour.	The DESeq2 (GalaxyVersion 2.11.40.6 + galaxy1) was used to determine differentiallyexpressed features from count tables of differential transcript abundances. log2FC > 1, FDR < 0.01.	WBPaper00065749:Heat-Shock_upregulated_N2
	Transcripts of noncoding genes that showed significantly decreased expression in muscle.	DESeq2 (version 1.24.0). Transcripts with a false-discovery rate adjusted p-value less than 0.05 were considered significantly differentially expressed.	WBPaper00062325:muscle_depleted_noncoding-RNA

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00005368
• Start: 15841837
• End: 15844214
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 2378

1 Sequence Ontology Term