WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35E8.12.1 Sequence Name  F35E8.12.1
Length (nt)  1201   Chromosome Location  V: 15923042-15924472
Chromosome . Primary Identifier  V Chromosome Location . Start  15923042
Chromosome Location . End  15924472 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35E8.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003698 nhr-108 F35E8.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35E8.12 F35E8.12 1017   V: 15923158-15923518

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35E8.12.1 15923042 15924472 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon210854   477   V: 15923042-15923518 Caenorhabditis elegans
Exon210857   112   V: 15923568-15923679 Caenorhabditis elegans
Exon210860   190   V: 15923730-15923919 Caenorhabditis elegans
Exon210862   271   V: 15923994-15924264 Caenorhabditis elegans
Exon210865   151   V: 15924322-15924472 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35E8.12.1 15923042 15924472 -1

1 Sequence

Length
1201

1 Sequence Ontology Term

Identifier Name Description
transcript