WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10A3.4.1 Sequence Name  F10A3.4.1
Length (nt)  1801   Chromosome Location  V: 16149240-16151899
Chromosome . Primary Identifier  V Chromosome Location . Start  16149240
Chromosome Location . End  16151899 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10A3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008634 F10A3.4 F10A3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10A3.4 F10A3.4 1710   V: 16149242-16149302

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10A3.4.1 16149240 16151899 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211436   63   V: 16149240-16149302 Caenorhabditis elegans
Exon211437   104   V: 16149706-16149809 Caenorhabditis elegans
Exon211439   104   V: 16149853-16149956 Caenorhabditis elegans
Exon211441   125   V: 16150002-16150126 Caenorhabditis elegans
Exon211443   107   V: 16150172-16150278 Caenorhabditis elegans
Exon211445   452   V: 16150325-16150776 Caenorhabditis elegans
Exon211447   324   V: 16150958-16151281 Caenorhabditis elegans
Exon211449   142   V: 16151334-16151475 Caenorhabditis elegans
Exon211451   380   V: 16151520-16151899 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10A3.4.1 16149240 16151899 1

1 Sequence

Length
1801

1 Sequence Ontology Term

Identifier Name Description
transcript