WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W08G11.4 Sequence Name  W08G11.4
Length (nt)  1629   Chromosome Location  V: 16357652-16357812
Chromosome . Primary Identifier  V Chromosome Location . Start  16357652
Chromosome Location . End  16357812
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W08G11.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32003 PPTR-1 61.8 542 Caenorhabditis elegans
 

Other

27 RNAi

WormBase ID
WBRNAi00079082
WBRNAi00055009
WBRNAi00019734
WBRNAi00079068
WBRNAi00079067
WBRNAi00079070
WBRNAi00079069
WBRNAi00060156
WBRNAi00079072
WBRNAi00060157
WBRNAi00079071
WBRNAi00060158
WBRNAi00079074
WBRNAi00060159
WBRNAi00079073
WBRNAi00086450
WBRNAi00079076
WBRNAi00086449
WBRNAi00079075
WBRNAi00079078
WBRNAi00079077
WBRNAi00086451
WBRNAi00079080
WBRNAi00079079
WBRNAi00079081
WBRNAi00079084
WBRNAi00079083

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W08G11.4 16357652 16357812 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012348 pptr-1 W08G11.4 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:W08G11.4 16357652 16357812 1
CDS:W08G11.4 16357863 16357933 1
CDS:W08G11.4 16358838 16359136 1
CDS:W08G11.4 16360106 16360329 1
CDS:W08G11.4 16361227 16361395 1
CDS:W08G11.4 16361714 16361815 1
CDS:W08G11.4 16362973 16363167 1
CDS:W08G11.4 16364051 16364341 1
CDS:W08G11.4 16365769 16365881 1
CDS:W08G11.4 16366596 16366599 1

1 Sequence

Length
1629

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W08G11.4.1 W08G11.4.1 2735   V: 16357521-16367574