WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57E7.1a.1 Sequence Name  F57E7.1a.1
Length (nt)  427   Chromosome Location  V: 16481580-16482059
Chromosome . Primary Identifier  V Chromosome Location . Start  16481580
Chromosome Location . End  16482059 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57E7.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010202 spig-6 F57E7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57E7.1a F57E7.1a 342   V: 16481606-16481669

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57E7.1a.1 16481580 16482059 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212195   90   V: 16481580-16481669 Caenorhabditis elegans
Exon212198   337   V: 16481723-16482059 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57E7.1a.1 16481580 16482059 1

1 Sequence

Length
427

1 Sequence Ontology Term

Identifier Name Description
transcript