WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49A5.9.1 Sequence Name  F49A5.9.1
Length (nt)  1098   Chromosome Location  V: 16860228-16861819
Chromosome . Primary Identifier  V Chromosome Location . Start  16860228
Chromosome Location . End  16861819 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49A5.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009860 clec-32 F49A5.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49A5.9 F49A5.9 1098   V: 16860228-16860610

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49A5.9.1 16860228 16861819 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212969   383   V: 16860228-16860610 Caenorhabditis elegans
Exon212970   129   V: 16860851-16860979 Caenorhabditis elegans
Exon212971   145   V: 16861040-16861184 Caenorhabditis elegans
Exon212972   152   V: 16861225-16861376 Caenorhabditis elegans
Exon212973   39   V: 16861438-16861476 Caenorhabditis elegans
Exon212974   54   V: 16861526-16861579 Caenorhabditis elegans
Exon212975   196   V: 16861624-16861819 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49A5.9.1 16860228 16861819 -1

1 Sequence

Length
1098

1 Sequence Ontology Term

Identifier Name Description
transcript