WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49A5.4a.1 Sequence Name  F49A5.4a.1
Length (nt)  1122   Chromosome Location  V: 16862012-16863890
Chromosome . Primary Identifier  V Chromosome Location . Start  16862012
Chromosome Location . End  16863890 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49A5.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009856 clec-24 F49A5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49A5.4a F49A5.4a 1122   V: 16862012-16862058

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49A5.4a.1 16862012 16863890 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212977   47   V: 16862012-16862058 Caenorhabditis elegans
Exon212978   239   V: 16862150-16862388 Caenorhabditis elegans
Exon212981   45   V: 16862556-16862600 Caenorhabditis elegans
Exon212983   149   V: 16862718-16862866 Caenorhabditis elegans
Exon212985   145   V: 16862913-16863057 Caenorhabditis elegans
Exon212987   129   V: 16863107-16863235 Caenorhabditis elegans
Exon212989   368   V: 16863523-16863890 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49A5.4a.1 16862012 16863890 1

1 Sequence

Length
1122

1 Sequence Ontology Term

Identifier Name Description
transcript