WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49A5.5a Sequence Name  F49A5.5a
Length (nt)  1209   Chromosome Location  V: 16865741-16865936
Chromosome . Primary Identifier  V Chromosome Location . Start  16865741
Chromosome Location . End  16865936
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49A5.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35549 CLEC-28, isoform a 44.1 402 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047784
WBRNAi00015280
WBRNAi00032507

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F49A5.5a 16865741 16865936 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009857 clec-28 F49A5.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F49A5.5a 16865741 16865936 1
CDS:F49A5.5a 16865983 16866159 1
CDS:F49A5.5a 16866204 16866248 1
CDS:F49A5.5a 16866305 16866453 1
CDS:F49A5.5a 16866501 16866645 1
CDS:F49A5.5a 16866689 16866817 1
CDS:F49A5.5a 16866859 16867226 1

1 Sequence

Length
1209

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49A5.5a.1 F49A5.5a.1 1313   V: 16865704-16867293