WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y102A5C.32.1 Sequence Name  Y102A5C.32.1
Length (nt)  978   Chromosome Location  V: 17007232-17008402
Chromosome . Primary Identifier  V Chromosome Location . Start  17007232
Chromosome Location . End  17008402 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y102A5C.32.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005581 sri-69 Y102A5C.32 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y102A5C.32 Y102A5C.32 978   V: 17007232-17007280

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5C.32.1 17007232 17008402 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213255   49   V: 17007232-17007280 Caenorhabditis elegans
Exon213256   425   V: 17007331-17007755 Caenorhabditis elegans
Exon213257   219   V: 17007801-17008019 Caenorhabditis elegans
Exon213258   129   V: 17008070-17008198 Caenorhabditis elegans
Exon213259   156   V: 17008247-17008402 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y102A5C.32.1 17007232 17008402 -1

1 Sequence

Length
978

1 Sequence Ontology Term

Identifier Name Description
transcript