WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05E12.6a.1 Sequence Name  T05E12.6a.1
Length (nt)  1502   Chromosome Location  V: 17085002-17089442
Chromosome . Primary Identifier  V Chromosome Location . Start  17085002
Chromosome Location . End  17089442 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05E12.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011487 T05E12.6 T05E12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05E12.6a T05E12.6a 1464   V: 17085038-17085215

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05E12.6a.1 17085002 17089442 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213431   214   V: 17085002-17085215 Caenorhabditis elegans
Exon213432   321   V: 17085263-17085583 Caenorhabditis elegans
Exon213433   544   V: 17088297-17088840 Caenorhabditis elegans
Exon213436   113   V: 17088888-17089000 Caenorhabditis elegans
Exon213437   107   V: 17089048-17089154 Caenorhabditis elegans
Exon213439   125   V: 17089197-17089321 Caenorhabditis elegans
Exon213441   78   V: 17089365-17089442 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05E12.6a.1 17085002 17089442 -1

1 Sequence

Length
1502

1 Sequence Ontology Term

Identifier Name Description
transcript